Statistics on protein trees

The protein tree pipeline is described at the following page.

This page provides a summary of the Ensembl phylogenetic analysis of protein families. The following views are available:

Size of the trees (per root node)

Species# Trees% Trees# Genes% GenesMin # genesMax # genesAverage # genesMin # speciesMax # speciesAverage # speciesAverage # genes per species
Eukaryota7386
2754010
269639372.9214576.52.0
Viridiplantae1551
408123
212547263.1213674.32.1
Chlorophyta186
485
2192.6222.01.3
Chlamydomonas reinhardtii strain CC-503 cw92 mt+925
3597
2413.9111.03.9
Ostreococcus lucimarinus CCE9901151
369
2152.4111.02.4
Streptophytina1596
556529
226875348.7213475.62.6
Embryophyta2718
842715
29059310.1213471.02.6
Tracheophyta699
216208
212611309.3213159.92.8
Selaginella moellendorffii1539
6319
2564.1111.04.1
Magnoliopsida2560
684533
27443267.4213083.82.5
Nymphaea colorata isolate Beijing-Zhang1983138
517
2263.7111.03.7
Magnoliopsida12009
399475
2376133.3212812.61.6
Amborella trichopoda899
3614
2554.0111.04.0
Mesangiospermae777
17503
294622.525314.81.4
commelinids397
15157
223138.225327.01.4
Poales404
12239
2139730.325416.01.5
Ananas comosus strain F153577
2206
2343.8111.03.8
Poaceae8277
237087
2149528.625315.51.6
BOP clade1187
11089
23899.32366.31.3
Oryzinae890
8557
2559.62126.91.3
Oryza11875
51326
2724.32113.61.1
Oryza glumipatula24
50
232.1111.02.1
Oryza rufipogon cultivar W194334
69
232.0111.02.0
Oryza sativa179
391
292.2222.01.1
Oryza sativa Japonica Group reference (Nipponbare) cultivar245
571
2122.3111.02.3
Oryza sativa Indica Group strain 93-11177
457
2142.6111.02.6
Oryza meridionalis cultivar OR44 (W2112)75
160
232.1111.02.1
Oryza longistaminata114
240
232.1111.02.1
Oryza glaberrima cultivar CG14127
527
2254.1111.04.1
Oryza nivara cultivar IRGC:10089721
47
262.2111.02.2
Oryza punctata cultivar IRGC:105690172
409
292.4111.02.4
Oryza brachyantha cultivar IRGC:101232223
566
2162.5111.02.5
Oryza barthii cultivar IRGC:10560837
77
232.1111.02.1
Leersia perrieri cultivar IRGC:105164169
547
2413.2111.03.2
Pooideae1751
30338
282717.32277.52.0
Brachypodium distachyon strain Bd21292
822
2192.8111.02.8
Triticeae1039
16129
227615.52197.12.2
Hordeinae7
65
2309.3222.04.6
Hordeum vulgare subsp. vulgare cultivar Morex547
2984
2335.5111.05.5
Secale cereale30
181
2286.0111.06.0
Triticinae7363
58845
21588.02163.32.6
Triticum453
1611
2333.6252.31.5
Triticum aestivum reference (Chinese spring) cultivar (component B)2
4
222.0111.02.0
Triticum timopheevii (component B)1142
3519
2283.1111.03.1
Triticum spelta cultivar Spelta (component B)16
53
283.3111.03.3
Triticum dicoccoides strain Zavitan (Atlit2015) (component B)72
156
242.2111.02.2
Triticum turgidum subsp. durum strain svevo (component B)21
54
242.6111.02.6
Triticum turgidum subsp. durum strain svevo (component U)1
3
333.0111.03.0
Aegilops umbellulata77
224
2222.9111.02.9
Triticum922
2643
2192.9262.31.3
Triticum744
2844
2303.8253.01.3
Triticum turgidum subsp. durum strain svevo (component A)11
25
232.3111.02.3
Triticum timopheevii (component A)909
3082
2493.4111.03.4
Triticum spelta cultivar Spelta (component A)8
25
253.1111.03.1
Triticum aestivum reference (Chinese spring) cultivar (component A)1
2
222.0111.02.0
Triticum dicoccoides strain Zavitan (Atlit2015) (component A)41
97
242.4111.02.4
Triticum urartu strain G1812 (PI428198)363
822
282.3111.02.3
Triticinae166
458
2212.8232.31.2
Triticum aestivum reference (Chinese spring) cultivar (component D)1
3
333.0111.03.0
Aegilops tauschii subsp. strangulata strain AL8/78106
538
2315.1111.05.1
Triticum spelta cultivar Spelta (component D)2
8
354.0111.04.0
Poeae174
1330
2567.6272.92.4
Avena sativa31
167
2205.4273.21.5
Avena sativa910
2860
2513.1232.11.4
Avena sativa cultivar OT3098 (component C)214
521
2282.4111.02.4
Avena sativa cultivar OT3098 (component A)101
220
242.2111.02.2
Avena sativa cultivar OT3098 (component D)103
222
232.2111.02.2
Avena sativa19
75
2283.9242.21.6
Avena sativa cultivar sang (component A)1
2
222.0111.02.0
Avena sativa cultivar sang (component U)4
29
2237.2111.07.2
Avena sativa cultivar sang (component C)3
9
253.0111.03.0
Lolium perenne reference strain872
2846
2473.3111.03.3
PACMAD clade1462
9802
2486.72133.61.8
Panicoideae807
4190
2435.22103.11.6
Paniceae834
3455
2444.1252.41.7
Setaria511
1373
2462.7222.01.3
Setaria viridis strain A10267
796
2373.0111.03.0
Setaria italica strain Yugu168
173
2112.5111.02.5
Panicum hallii var. hallii reference (HAL2) ecotype208
758
2523.6111.03.6
Echinochloa crus-galli reference strain2985
10400
2503.5111.03.5
Digitaria exilis strain digitaria_exilis845
2009
2352.4111.02.4
Andropogoneae355
1253
2383.5262.31.4
Zea mays strain B73642
2216
2403.5111.03.5
Saccharum spontaneum464
1133
2212.4242.11.1
Saccharum spontaneum strain AP85-441 (component D)24
48
222.0111.02.0
Saccharum spontaneum strain AP85-441 (component C)12
24
222.0111.02.0
Saccharum spontaneum strain AP85-441 (component B)28
58
242.1111.02.1
Saccharum spontaneum strain AP85-441 (component A)20
44
232.2111.02.2
Sorghum bicolor strain BTx623269
814
2393.0111.03.0
Eragrostis453
2129
2404.7222.02.3
Eragrostis tef cultivar Dabbi818
2386
2432.9111.02.9
Eragrostis curvula strain Tanganyika1562
5169
2533.3111.03.3
Musa acuminata subsp. malaccensis cultivar Doubled-haploid Pahang (DH-Pahang)162
533
2513.3111.03.3
Asparagus officinalis strain DH00/086626
2557
2534.1111.04.1
Dioscorea cayenensis subsp. rotundata1057
4811
2454.6111.04.6
Papaver somniferum strain High Noscapine 1 (HN1)1223
3947
2263.2111.03.2
Pentapetalae6964
81528
2193911.72716.51.6
Chenopodiaceae463
3052
2576.6222.03.3
Chenopodium quinoa strain PI614886321
1719
2515.4111.05.4
Beta vulgaris subsp. vulgaris strain KWS2320 DH269
882
2373.3111.03.3
asterids543
2977
2365.52143.31.5
lamiids333
1785
2315.4293.21.6
Solanales102
602
2345.9253.21.8
Ipomoea triloba strain NCNSP0323332
1285
2423.9111.03.9
Solanaceae954
8003
2558.4242.73.1
Solanum367
1447
2403.9222.02.0
Solanum lycopersicum cultivar Heinz 1706269
871
2403.2111.03.2
Solanum tuberosum cultivar DM 1-3 516 R44963
6501
2526.8111.06.8
Nicotiana attenuata strain UT488
3032
2426.2111.06.2
Capsicum annuum strain Criollo de Morelos 334509
2810
2505.5111.05.5
Coffea canephora strain DH200-94177
545
2173.1111.03.1
Lamiales83
398
2174.8232.51.9
Oleeae359
1475
2564.1222.02.1
Olea europaea subsp. europaea variety Farga1055
4287
2544.1111.04.1
Fraxinus excelsior reference strain96
207
262.2111.02.2
Sesamum indicum strain Zhongzhi No. 13338
1928
2495.7111.05.7
campanulids41
206
2305.0242.52.0
Daucus carota subsp. sativus strain DH1755
3255
2494.3111.04.3
Asteraceae560
3432
2526.1232.22.8
Helianthus annuus cultivar XRQ/B2381
11873
2565.0111.05.0
Cynara cardunculus var. scolymus isolate 2C182
559
2313.1111.03.1
Lactuca sativa1112
7462
2576.7111.06.7
Actinidia chinensis var. chinensis strain Red574
253
2233.4111.03.4
rosids2897
23229
213608.02494.41.7
fabids1758
8961
2515.12253.11.6
Benincaseae590
2173
2393.7232.61.4
Citrullus lanatus strain 9710339
129
2243.3111.03.3
Cucumis289
975
2453.4222.01.7
Cucumis melo720
3246
2544.5111.04.5
Cucumis sativus strain 993062
158
282.5111.02.5
Rosales202
817
2344.0272.41.7
Cannabis sativa755
3931
2485.2111.05.2
Ficus carica cultivar Dottato1284
3675
2332.9111.02.9
Rosaceae359
2899
2458.1253.12.4
Rosa chinensis1208
3895
2353.2111.03.2
Amygdaloideae135
853
2396.3242.82.2
Prunus1434
7059
2524.9232.22.2
Prunus dulcis strain Texas123
394
2203.2111.03.2
Prunus avium strain Satonishiki1355
6852
2575.1111.05.1
Prunus persica strain Lovell62
154
242.5111.02.5
Malus domestica strain Golden Delicious323
1036
2373.2111.03.2
Malpighiales49
196
2154.0222.02.0
Manihot esculenta216
940
2324.4111.04.4
Populus trichocarpa179
641
2363.6111.03.6
50 kb inversion clade1109
12795
25411.52186.42.0
Arachis hypogaea2464
13826
2545.6111.05.6
NPAAA clade895
7682
2558.62163.92.2
IRL clade782
7697
2579.8273.72.5
Trifolieae235
1196
2365.1222.02.5
Medicago truncatula666
2171
2443.3111.03.3
Trifolium pratense strain Milvus B435
1327
2363.1111.03.1
Fabeae863
8232
2559.5252.83.4
Pisum sativum1147
5936
2535.2232.12.5
Pisum sativum cultivar Cameor883
3625
2414.1111.04.1
Pisum sativum CAAS_Psat_ZW6_1.0841
6512
2487.7111.07.7
Pisum sativum JIC_Psat_v1.351
163
2303.2111.03.2
Lathyrus sativus153
831
2505.4111.05.4
Vicia faba356
1044
2212.9111.02.9
Phaseoleae806
5953
2547.4293.12.4
Lablab purpureus31
96
2103.1111.03.1
Glycine subgen. Soja245
1052
2484.3222.02.1
Glycine max strain Williams 82186
596
2303.2111.03.2
Glycine soja137
1410
25010.3111.010.3
Vigna137
1212
2508.8232.14.3
Vigna radiata var. radiata strain VC1973A46
107
242.3111.02.3
Vigna unguiculata cultivar IT97K-499-3583
664
2578.0111.08.0
Vigna angularis strain Jingnong 6906
5086
2535.6111.05.6
Phaseolus vulgaris strain G1983359
358
2416.1111.06.1
Cajanus cajan653
5341
2528.2111.08.2
Sphenostylis stenocarpa246
940
2393.8111.03.8
Lupinus angustifolius strain Tanjil209
630
2113.0111.03.0
Fagales107
619
2305.8242.42.4
Quercus351
3180
2549.1222.04.5
Quercus suber isolate HL8172
1474
2518.6111.08.6
Quercus lobata372
1221
2493.3111.03.3
Corylus avellana cultivar Tombul203
986
2424.9111.04.9
Juglans regia cultivar Chandler177
1191
2516.7111.06.7
malvids224
1265
2475.62163.41.6
Sapindales40
151
2123.8222.01.9
Pistacia vera strain Batoury220
538
2112.4111.02.4
Citrus x clementina strain Clemenules121
343
292.8111.02.8
Eucalypteae726
2741
2533.8222.01.9
Eucalyptus grandis strain BRASUZ1155
399
2202.6111.02.6
Corymbia citriodora subsp. variegata genotype CCV2-018178
510
2222.9111.02.9
Malvaceae271
1245
2384.6232.22.1
Theobroma cacao reference (Matina) cultivar382
1733
2484.5111.04.5
Corchorus capsularis strain CVL-1577
1677
2222.9111.02.9
Gossypium raimondii isolate GPD5lz145
1196
2498.2111.08.2
Brassicaceae2650
33290
214812.62126.21.9
Camelineae452
3213
2487.1263.61.8
Arabidopsis689
2918
2484.2232.12.0
Arabidopsis halleri subsp. gemmifera strain W302272
1531
2615.6111.05.6
Arabidopsis thaliana strain Columbia50
129
292.6111.02.6
Arabidopsis lyrata subsp. lyrata strain MN47268
790
2272.9111.02.9
Camelina sativa508
1835
2433.6232.31.5
Camelina sativa strain dh55 (component G2)37
81
242.2111.02.2
Camelina sativa strain dh55 (component G3)78
194
272.5111.02.5
Camelina sativa strain dh55 (component G1)29
64
242.2111.02.2
Eutrema salsugineum52
286
2525.5111.05.5
Arabis alpina252
1709
2566.8111.06.8
Brassica6707
36488
2565.4242.42.1
Brassica juncea cultivar Sichuan Huangzi703
2676
2473.8111.03.8
Brassica oleracea var. oleracea strain TO1000338
1806
2475.3111.05.3
Brassica rapa subsp. trilocularis cultivar R-o-18439
2301
2565.2111.05.2
Brassica napus strain Darmor-bzh679
1693
2332.5111.02.5
Vitis vinifera516
4017
2567.8111.07.8
Kalanchoe fedtschenkoi415
1260
2433.0111.03.0
Marchantia polymorpha325
1346
2344.1111.04.1
Physcomitrium patens strain Gransden 20041028
3320
2423.2111.03.2
Chara braunii strain S2761346
14747
218511.0111.011.0
Opisthokonta161
1018
21126.3253.61.3
Saccharomyces cerevisiae S288C282
751
2292.7111.02.6
Bilateria2317
10588
21954.6242.81.4
Ecdysozoa351
1133
21383.2222.01.3
Caenorhabditis elegans strain N21499
7661
22835.1111.04.5
Drosophila melanogaster641
2505
2553.9111.03.6
Chordata849
2181
2262.6222.01.2
Ciona savignyi271
923
2533.4111.03.4
Homo sapiens819
3317
2974.1111.03.7
Rhodophyta327
962
2152.9232.51.2
Chondrus crispus strain Stackhouse353
1415
2304.0111.04.0
Bangiophyceae196
441
272.2222.01.1
Cyanidioschyzon merolae strain 10D49
125
2112.6111.02.6
Galdieria sulphuraria strain 074W159
678
2484.3111.04.3